My method is to identify them and then actively expose myself to imagery and stories that counter those biases to reduce my undesirable intuitive responses to things. You train your intuition by reinforcement with good examples and counterexamples -- like training anything, you get more intuition about how to do things by seeing good and bad examples. I'm using intuition to mean the thinking that goes on before you're narrative gets a hold of it.
Don't see why implicit biases should be any harder to combat than any other bias you see in a scientific field, and scientists all have to learn and work hard to combat them to avoid results that don't hold up to scrutiny. I assume engineers are similar, you probably have bad habits coming in or poor intuition about how things should fit together. By example and practice you train your intuition to align with reality.
Don't see why implicit biases should be any harder to combat than any other bias you see in a scientific field, and scientists all have to learn and work hard to combat them to avoid results that don't hold up to scrutiny. I assume engineers are similar, you probably have bad habits coming in or poor intuition about how things should fit together. By example and practice you train your intuition to align with reality.