The current work project[1] has all of these, with one substitution: Pyenv, Poetry, Pytest, pytest-cov with 100% branch coverage, pre-commit, Pylint rather than Flake8, Black, mypy (with a stricter configuration than recommended here), and finally isort. These are all super helpful.

There's also a simpler template repo[2] with almost all of these.

[1] https://github.com/linz/geostore/

[2] https://github.com/linz/template-python-hello-world