Also, if this weapon is really powerful, you won't keep the frequencies it operates on a secret. Something able to fry a protected drone half a mile away is detectable on the other side of the earth.
And when the enemy knows what frequencies this operates on, they can use quarter wave chokes in the sliding electromagnetic seals around the propeller shafts etc, making the craft able to withstand even more microwave power.
Why would it operate on one strictly defined frequency? I would expect several quickly switched, and maybe even a chirp-style sliding frequency pulse, exactly to render narrow-band protections ineffectual.
If your drone had a way to communicate with the external world that would be its achilles heel. Im sure this is being researched as we speak and this type of defense weapon will make an impact on FPV warfare drones, maybe they will be designed in a new way to combat this or they’ll learn to detect what to stay away from.
adjustable attenuators are well known already. Software inside the drone can dial up the attenuation on the antenna whenever it is under attack.
Also, by using ultra wideband for the comms, there will always be some frequencies that an attack isn't happening on - and sets of notch filters can let those through.
If so, this weapon is pointless, because any enemy would immediately think the same.