Yes, as a learning-first (teaching) platform, the custom DE is an advantage.
But further, the R.Pi does not need to be an over-sized solution or lead a benchmark with a top score. It just needs to be fast enough for learning and hacking with GPIO.
A computer doesn't need to have a gigahertz burst mode just to run an efficient little OS for coding.
As for Wayland, it only recently became the default WM. But it is nice to have.
I’m not sure I understand the point, because Debian supports N100 PCs natively, too. Or is a custom DE the advantage?